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ConFooBio
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gmse
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Commit History
Commits on Jun 15, 2022
Update the website given the referencing errors and the new version
bradduthie
committed
Jun 15, 2022
4b1b2ce
Fix some citation errors in the simulated annealing vignette
bradduthie
committed
Jun 15, 2022
6cdede4
Skip the make utilities test on CRAN because it was causing problems with the Fedora libraries, for some reason
bradduthie
committed
Jun 15, 2022
a2ae485
Commits on May 29, 2022
Rework files and run pkgdown to rebuild the website with the new information
bradduthie
committed
May 29, 2022
54e744c
Commits on May 28, 2022
Final edits before the CRAN submission is made; now need to switch over for the website
bradduthie
committed
May 28, 2022
4317af7
Commits on May 23, 2022
Update the description and news, and comments for CRAN
bradduthie
committed
May 23, 2022
9d89aa8
new documentation for GMSE
bradduthie
committed
May 23, 2022
50a4ba8
Add the vignette for simulated annealing
bradduthie
committed
May 23, 2022
8bcede1
Update the tests for the paras vector increase in length, and add tests for the simulated annealing
bradduthie
committed
May 23, 2022
e18a47b
Fix the R functions so that the simulated annealing can be used in gmse and gmse_apply -- also, fix a strange complaint from R within the if statement of the gmse_apply_summary function
bradduthie
committed
May 23, 2022
ffd2586
Remove the printing that was needed to test the simulated annealing algorithm
bradduthie
committed
May 23, 2022
b14e2e8
Get the vignettes finalised, specifically SI9, which explains how simulated annealing in GMSE works
bradduthie
committed
May 23, 2022
9ac8398
Commits on Apr 16, 2022
Remove the code for printing off the tests for the simulated annealing algorithm and genetic algorithm
bradduthie
committed
Apr 16, 2022
b3dfc8c
Data on the simulated annealing versus genetic algorithm
bradduthie
committed
Apr 16, 2022
0fb53ac
Better setup for running the comparisons between the genetic algorithm and simulated annealing
bradduthie
committed
Apr 16, 2022
046b776
Commits on Apr 15, 2022
Update notebook with a draft of a new vignette for simulated annealing option in GMSE
bradduthie
committed
Apr 15, 2022
0b0c67d
Minor update
bradduthie
committed
Apr 15, 2022
d445fe5
Commits on Apr 14, 2022
CLean the simulated annealing file so that it runs again
bradduthie
committed
Apr 14, 2022
6d693e8
There was an issue with the simulated annealing printout, which amazingly didn't cause a memory problem -- all fixed and the data should work now
bradduthie
committed
Apr 14, 2022
911c8ff
This point is where I am printing out the results of the fitness for agents using the simulated annealing algorithm
bradduthie
committed
Apr 14, 2022
46c264b
This point is where I am printing out the results of fitness for agents using the genetic algorithm
bradduthie
committed
Apr 14, 2022
ed9bd6d
Update the version and add some explanation of new features
bradduthie
committed
Apr 14, 2022
d4b8e1d
Initialise a new vignette to explain the simulated annealing approach
bradduthie
committed
Apr 14, 2022
0c54740
Fix the memory management issue with corrected use of pointers, which could potentially cause some issues in certain systems
bradduthie
committed
Apr 14, 2022
f0de19d
Tests of the simulated annealing code put in place
bradduthie
committed
Apr 14, 2022
deabc8d
Test simulated annealing informally
bradduthie
committed
Apr 14, 2022
2755fac
Commits on Mar 26, 2022
Fix the tests so that the paras function is correct, thereby resolving a segfault that occurred when the package was checked
bradduthie
committed
Mar 26, 2022
f4d9b46
Commits on Mar 20, 2022
Update that includes the manager for simulated annealing, but there is a segmentation fault in here somewhere that needs to be fixed
bradduthie
committed
Mar 20, 2022
ddeeaff
Introduce the option for using simulated annealing for decision-making in the users instead of the genetic algorithm. At the moment, this is only possible for users, but will extend to the managers…
bradduthie
committed
Mar 20, 2022
7475d4e
Initial R code for simulated annealing as an alternative to the genetic algorithm
bradduthie
committed
Mar 20, 2022
af805fe
Commits on Aug 3, 2021
Update GMSE notebook with v0.7 additions
bradduthie
committed
Aug 3, 2021
da4fea1
Fix a minor bug mentioned in Issue
#76
-- needed to change the 'FALSE' to '0' in manager function for C.
@AdrianBach
-- would be could to double check that this if-else is necessary?
bradduthie
committed
Aug 3, 2021
ebb56a3
Commits on Aug 2, 2021
Fix the funding statement to say that
@bradduthie
has received funding from Leverhulme
bradduthie
committed
Aug 2, 2021
c4c5eb5
Remove the gmse_apply test on CRAN
bradduthie
committed
Aug 2, 2021
836e59c
Changing the R version needed to 4.0
bradduthie
committed
Aug 2, 2021
6adaeeb
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