A fast and scalable CUDA implementation to conduct highly parallelized evolutionary tests on large scale genomic data.
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Updated
Jul 18, 2024 - Cuda
A fast and scalable CUDA implementation to conduct highly parallelized evolutionary tests on large scale genomic data.
Rapid standardisation and quality control of GWAS or QTL summary statistics
A Python GUI program with VCF file manipulation features like Creating, exporting.
A script that takes user input to create a .vcf file and a QR-Code that contains this file.
API to read, write, and filter DNA sequence alignment files
A formatter that converts vcf files to Outlook contacts
A .NET vCard parser with Android contacts2.db and MeCard support
vSNP -- validate SNPs
Generate an interactive HTML-based report from M.tb SnpEff annotated VCF(s)
Visualize microbial evolution at the SNP level!
Modify KASP assay calls to a VCF format
Genotype likelihood simulator for VCF/BCF files
echoverse module: Single- and multi-threaded downloading functions.
to analyze multiple VCF files and generate a summary of variant metrics
Learning the Variant Call Format
Lightweight standalone tool to reduce size of VCF files through filtering
Predicting true low-VAF SNVs in HPV using triplicate NGS samples and machine learning
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