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1. pygran pygran Public

   A DEM toolkit for rapid simulation & quantitative analysis of granular systems

   Python 70 15

2. tbereau/auto_martini tbereau/auto_martini Public

   Automatic MARTINI parametrization of small organic molecules

   Python 57 21

3. MolSSI/covid MolSSI/covid Public

   MolSSI SARS-CoV-2 Biomolecular Simulation Data and Algorithm Store

   HTML 27 49

4. HDFGroup/hdf5-json HDFGroup/hdf5-json Public

   Specification and tools for representing HDF5 in JSON

   Python 72 25

5. CTCNano/DMS CTCNano/DMS Public

   Deductive Multiscale Simulator

   C 2

6. pyliggghts pyliggghts Public

   LIGGGHTS DEM engine with python API

   C++ 1