Gollisch Lab

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STNMFanalysis STNMFanalysis Public

Code for neuronal subunit analysis with spike-triggered non-negative matrix factorization

MATLAB 5 1
STNMF_with_AFHALS STNMF_with_AFHALS Public

A fast and versatile implementation of spike-triggered non-negative matrix factorization (STNMF) based on accelerated/fast HALS algorithms

Python 2
AnalysisForDSPopulationCodes AnalysisForDSPopulationCodes Public

Analysis methods for populations of direction-selective ganglion cells. Accompanying a manuscript by Kühn and Gollisch.

MATLAB 1
ExtractEyeFixationsForNaturalStimuli ExtractEyeFixationsForNaturalStimuli Public

Extract and format fixations from eye tracking data

Python 1
IRScellSimulation IRScellSimulation Public

Simulation of a specific type of retinal ganglion cell under saccade-like image transitions. Accompanying a manuscript by Krishnamoorthy, Weick, and Gollisch.

MATLAB 1
GGNB-python-course GGNB-python-course Public

GGNB Short Method Course "Spike-train analysis with Python" in the Gollisch Lab

Jupyter Notebook 3

Repositories

GGNB-python-course Public
GGNB Short Method Course "Spike-train analysis with Python" in the Gollisch Lab

gollischlab/GGNB-python-course’s past year of commit activity

Jupyter Notebook 0 3 0 0 Updated May 7, 2024
STNMF_with_AFHALS Public
A fast and versatile implementation of spike-triggered non-negative matrix factorization (STNMF) based on accelerated/fast HALS algorithms

gollischlab/STNMF_with_AFHALS’s past year of commit activity

Python 2 MIT 0 0 0 Updated Apr 27, 2024
ConvertDatMEA Public
Extract channels from multielectrode array (MEA) recordings. Can convert from MSRD or MCD files to a binary format.

gollischlab/ConvertDatMEA’s past year of commit activity

C# 0 MIT 0 0 0 Updated Apr 21, 2024
RecreateWhiteNoiseStimuliWithPython Public
Code for regenerating the random-number-based contrast values used for white-noise stimulation in the Gollisch Lab. Used for both temporal and spatiotemporal stimuli.

gollischlab/RecreateWhiteNoiseStimuliWithPython’s past year of commit activity

Python 0 MIT 0 0 0 Updated Jan 20, 2024
ExtractEyeFixationsForNaturalStimuli Public
Extract and format fixations from eye tracking data

gollischlab/ExtractEyeFixationsForNaturalStimuli’s past year of commit activity

Python 1 MIT 0 0 0 Updated Aug 17, 2023
Subunits_with_Superresolution_Tomography Public
Simulations of subunit model of a retinal ganglion cell in response to Mexican-hat-like bar stimuli and reconstruction of subunit layout via inverse Radon transform.

gollischlab/Subunits_with_Superresolution_Tomography’s past year of commit activity

Python 0 GPL-3.0 0 0 0 Updated Jul 5, 2023
phy-MEA Public Forked from cortex-lab/phy
Phy (older version) stable for MEA recordings at the cost of lacking the latest features

gollischlab/phy-MEA’s past year of commit activity

Python 0 BSD-3-Clause 156 0 0 Updated Jul 18, 2022
phy_plugins Public Forked from ycanerol/phy_plugins
Plugins for the manual spike sorting program phy

gollischlab/phy_plugins’s past year of commit activity

Python 0 1 0 0 Updated Dec 17, 2021
pymer Public Forked from ycanerol/pymer
Collection of Python scripts for analyzing extracellular multielectrode array recordings from the retina in the Gollisch lab, Göttingen.

gollischlab/pymer’s past year of commit activity

Python 0 1 0 0 Updated Mar 15, 2021
ChromaticIntegrationAnalysis Public
Code for analyzing chromatic integration properties of recorded retinal ganglion cells in the data accompanying the paper by Khani and Gollisch, 2021.

gollischlab/ChromaticIntegrationAnalysis’s past year of commit activity

MATLAB 0 MIT 0 0 0 Updated Feb 23, 2021