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Issues list

Move docs to sgkit.dev documentation Improvements or additions to documentation
#1212 opened Mar 29, 2024 by hammer
Sequential VCF parsing IO Issues related to reading and writing common third-party file formats
#1183 opened Feb 5, 2024 by hammer
@jeromekelleher
1
How do I... additions documentation Improvements or additions to documentation
#1165 opened Jan 6, 2024 by hammer
3
How do I add a new sample or variant data variable from a file? documentation Improvements or additions to documentation
#1151 opened Dec 2, 2023 by hammer
1
read_plink from cloud storage IO Issues related to reading and writing common third-party file formats
#1150 opened Dec 2, 2023 by hammer
1
Can we use KvikIO? IO Issues related to reading and writing common third-party file formats
#1127 opened Sep 7, 2023 by hammer
Validation build is failing process + tools
#1112 opened Aug 14, 2023 by hammer
Use ruff for Python linting? process + tools
#1092 opened May 25, 2023 by hammer
1
Implement COAST enhancement New feature or request
#982 opened Jan 2, 2023 by hammer
Example notebook exercising gene-ε documentation Improvements or additions to documentation
#959 opened Nov 21, 2022 by hammer
@tomwhite
Example notebook exercising NVIDIA work on REGENIE documentation Improvements or additions to documentation
#958 opened Nov 21, 2022 by hammer
@hammer
Example notebook exercising pairwise distance on GPU documentation Improvements or additions to documentation
#957 opened Nov 21, 2022 by hammer
@jeromekelleher
2
tskit example of sgkit Zarr for intermediate data documentation Improvements or additions to documentation
#955 opened Nov 21, 2022 by hammer
2
Update DocSearch documentation Improvements or additions to documentation
#787 opened Dec 28, 2021 by hammer
Document how to release documentation Improvements or additions to documentation process + tools
#691 opened Sep 30, 2021 by hammer
1
1
Canine GWAS example notebook documentation Improvements or additions to documentation
#688 opened Sep 28, 2021 by hammer
@hammer @eric-czech
3
Follow up on guvectorize use of fastmath upstream Used when our build breaks due to upstream changes
#685 opened Sep 22, 2021 by hammer
PyData APIs notebook documentation Improvements or additions to documentation
#684 opened Sep 22, 2021 by hammer
@hammer
2
Clean up docs documentation Improvements or additions to documentation
#680 opened Sep 20, 2021 by hammer
3 tasks
1
@hammer
1
Migrate Discourse posts to GitHub Discussions
#670 opened Sep 14, 2021 by hammer
2 tasks
@hammer
Port GFF3 I/O methods of scikit-allel to sgkit? IO Issues related to reading and writing common third-party file formats
#657 opened Aug 31, 2021 by hammer
Ancestral vs. derived allele
#585 opened May 27, 2021 by hammer
5
Remove mention of CuPy in docs documentation Improvements or additions to documentation
#579 opened May 23, 2021 by hammer
Source of notebooks documentation Improvements or additions to documentation
#556 opened May 7, 2021 by hammer
PRS notebook documentation Improvements or additions to documentation
#555 opened May 5, 2021 by hammer
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