Wellcome Trust Sanger Institute - Human Genetics Informatics

Analysing genomic data at scale for the Human Genetics Program

21 followers
Cambridge, UK
https://www.sanger.ac.uk/science/groups/human-genetics-informatics-hgi
hgi@sanger.ac.uk

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nextflow-pipelines nextflow-pipelines Public

Nextflow HGI pipelines

Nextflow 4 2
hail_analysis_pipelines hail_analysis_pipelines Public

Hail based analysis pipelines for HG projects

Python 1 2
ibackup ibackup Public

Performant backups of many files to iRODS

Go
softpack-web softpack-web Public

Softpack Web provides a graphical user interface for Softpack services.

TypeScript
softpack-core softpack-core Public

SoftPack Core

Python
go-softpack-builder go-softpack-builder Public

Go implementation of a softpack builder service

Go

Repositories

go-farmer Public

wtsi-hgi/go-farmer’s past year of commit activity

Go 0 MIT 0 0 0 Updated Jul 20, 2024
softpack-web Public
Softpack Web provides a graphical user interface for Softpack services.

wtsi-hgi/softpack-web’s past year of commit activity

TypeScript 0 MIT 0 5 6 Updated Jul 19, 2024
farmers-report Public
Weekly report for farm usage

wtsi-hgi/farmers-report’s past year of commit activity

R 0 0 0 1 Updated Jul 19, 2024
QTLight Public
eqtl analysis pipeline using tensorqtl

wtsi-hgi/QTLight’s past year of commit activity

Python 6 GPL-3.0 5 0 0 Updated Jul 18, 2024
wes-qc Public
Sample and variant QC for exome cohort studies

wtsi-hgi/wes-qc’s past year of commit activity

Jupyter Notebook 1 0 0 0 Updated Jul 18, 2024
yascp Public
scRNA multimodal analysis pipeline utilised for large dataset processing

wtsi-hgi/yascp’s past year of commit activity

Python 13 GPL-3.0 7 0 1 Updated Jul 17, 2024
sarek Public

wtsi-hgi/sarek’s past year of commit activity

Nextflow 0 MIT 2 0 1 Updated Jul 16, 2024
spack-repo Public
Spack Package Repository

wtsi-hgi/spack-repo’s past year of commit activity

Python 1 MIT 3 0 0 Updated Jul 16, 2024
nf_longread Public
nextflow pipeline for long read processing

wtsi-hgi/nf_longread’s past year of commit activity

Nextflow 0 MIT 0 0 0 Updated Jul 11, 2024
r-spack-recipe-builder Public
Spack recipe creator for R packages in CRAN and Bioconductor used to build up the ubeR module for use in farm22

wtsi-hgi/r-spack-recipe-builder’s past year of commit activity

Python 0 0 0 0 Updated Jul 10, 2024