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1. SCRIP SCRIP Public

   SCRIP(Single Cell Regulatory network Inference using ChIP-seq) is a tool for evaluating the binding enrichment of specific TR at single-cell resolution based on scATAC-seq.

   Python 3 1

2. CHIPS CHIPS Public

   Forked from liulab-dfci/CHIPS

   A Snakemake pipeline for quality control and reproducible processing of chromatin profiling data

   Python

3. DEAP DEAP Public

   Differential Expression Analysis Pipeline

   Python 1

4. mdseqpos mdseqpos Public

   Python 1