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Questions tagged [p-value]

In statistical significance testing the p-value is the probability of obtaining a test statistic at least as extreme as the one that was actually observed.

p-value
0 votes
0 answers
9 views

Significance of the coefficients of a multinomial mixed regression built with npmlt function

I fitted (using npmlt function) a mixte multinomial regression model which ran without errors. I expected that the outputs of the model include p-values that I didn't find. My need now is that someone ...
Romaine TCHEDJI's user avatar
-2 votes
0 answers
24 views

Fitting distribution to data : test results doesn’t match graphs

I want to test the fit of the data before moving on to modeling I know very well that the data are gamma distributed and even graphics (QQ plot nd cdfit) confirm the preknown distribution but the ...
Youness ben osmane's user avatar
0 votes
0 answers
19 views

Determining the p-value of a test statistic, which is not distributed according to a commonly known distribution under the null hypothesis [migrated]

Currently I am working in R on a project that aims to identify Dragon King events (massive outliers) in large datasets. These outliers appear for example in the city sizes in England, where London is ...
user25936873's user avatar
1 vote
1 answer
18 views

Grouped barplots with error bars and pvalue pairwise comparisons

Am new to stackoverflow and would love some help. I have a dataset as below. I would like to create a barplot showing pairwise comparisons between treatment groups as shown but with significance stars ...
Kiplagat Noel's user avatar
1 vote
1 answer
24 views

Replicating P-value of `NeweyWest` function in `sandwich` package

I would like to replicate the p-value of NeweyWest function in the sandwich package. Could you let me know if there is any documentation for the explanation? Sample dataset # Question: R: Replicating ...
J.K.'s user avatar
  • 371
0 votes
0 answers
30 views

How to add pvalues for multiple comparisons between more than two groups for categorical variables in gt-summary

I want to compare baseline characteristics between more than two studygroups and I prefer to use gt-summary to make the table.How can I add pvalues, corrected for multiple testing, to the table for ...
user25268315's user avatar
0 votes
0 answers
17 views

Compare all possible combinations of a multiple linear regression model in R based on p-values

I want to find the best combination of explanatory variables for a linear multiple regression model. I dont want a comparison based on Rsquared or other "overall" metrics. But I want to find ...
KathaRRRina's user avatar
1 vote
1 answer
55 views

Methods to test independence in a non parametric setting

I am using random forest as my regression model and have the following data where X is a high dimensional data set in a simplex form. I have tried using permutation and the following code: import ...
user25021893's user avatar
0 votes
1 answer
71 views

cor.test and stat_cor giving different correlation p-values in R

I am trying to calculate Pearson correlation between two variables using cor.test in R and also represent the data using ggplot2. While plotting the data I am using stat_cor to add the correlation ...
accibio's user avatar
  • 533
0 votes
0 answers
19 views

Why doesn't my p value give the same in gtsummary()?

I have this df df # A tibble: 248 × 2 asignado mxsitam <chr> <chr> 1 Control No 2 Control No 3 Intervencion No 4 Intervencion Si 5 ...
mala fama's user avatar
2 votes
1 answer
34 views

What is by default significance level of Modified Mann Kendal test in R?

I am using Modified Mann Kendal test in R. I want to know its by default value for significance level. Can we set the significance level manually? For example: 5%, 10% etc. if possible, then how can ...
tom's user avatar
  • 53
1 vote
0 answers
31 views

p-value using pool.scalar in R

How can I compute the p-value of the model coefficients of a multiple imputation model using the pool.scalar function? When using the pool function I can just do summary(pool(imputed_model)) and get ...
thdr's user avatar
  • 11
0 votes
1 answer
45 views

How to fetch p-value from ADF test (ur.df)?

i have the following r code: for (p in 1:5) { # Perform ADF test R.urdf_IND <- ur.df(L.ts$m_IND, type = "trend", lags = p) # Extract test statistic test_statistic <- R.urdf_IND@...
Sim Kn's user avatar
  • 3
1 vote
1 answer
53 views

R function to obtain Kendall's tau p-value with covariates? [closed]

I have two variables and a third covariate adjustor. How can I get an adjusted Kendall tau estimate plus one p-value? a <- c(1.07, 1.9, -0.603, -0.391, -0.416, -0.376, -0.367, -0.296, 1.44, -0.698) ...
Abiologist's user avatar
2 votes
0 answers
46 views

Add p-value breaks to a gene oncology dot plot [closed]

I am so close to finishing up a gene oncology-gene ratio figure for a lab assignment, but I am struggling with adjusting my p-value breaks. I'd like to have control to having p-value range from 0.001 ...
KenH's user avatar
  • 31

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