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213 Open 472 Closed
213 Open 472 Closed
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Issues list

Create bitpacking filter for biallelic diploid datasets good first issue Good for newcomers IO Issues related to reading and writing common third-party file formats
#80 opened Jul 30, 2020 by eric-czech
5
Add docstring linter documentation Improvements or additions to documentation process + tools
#70 opened Jul 28, 2020 by eric-czech
5
Add benchmark suite performance process + tools
#68 opened Jul 27, 2020 by eric-czech
1 task
6
Requirements for UKB GWAS core operations Issues related to domain-specific functionality such as LD pruning, PCA, association testing, etc.
#67 opened Jul 24, 2020 by eric-czech
8 of 11 tasks
9
Add tskit as import format? enhancement New feature or request IO Issues related to reading and writing common third-party file formats question Further information is requested
#64 opened Jul 24, 2020 by jeromekelleher
9
Replace LinearRegressionResult with Dataset enhancement New feature or request
#63 opened Jul 23, 2020 by eric-czech
Add invariant validation function core operations Issues related to domain-specific functionality such as LD pruning, PCA, association testing, etc.
#61 opened Jul 23, 2020 by tomwhite
3
VCF Zarr improvements IO Issues related to reading and writing common third-party file formats
#56 opened Jul 21, 2020 by tomwhite
2 of 4 tasks
2
Track and improve the performance of allele counting method core operations Issues related to domain-specific functionality such as LD pruning, PCA, association testing, etc. performance
#49 opened Jul 16, 2020 by eric-czech
7
Test IO on large scale data IO Issues related to reading and writing common third-party file formats performance
#48 opened Jul 16, 2020 by jeromekelleher
@jeromekelleher
25
Genome region query API data representation Issues related to how data is represented: data types, data structures, indexes, access methods, etc
#25 opened Jul 8, 2020 by alimanfoo
15
Choose configuration library process + tools
#22 opened Jul 8, 2020 by hammer
3
Genotype call array to dosage core operations Issues related to domain-specific functionality such as LD pruning, PCA, association testing, etc. data representation Issues related to how data is represented: data types, data structures, indexes, access methods, etc
#21 opened Jul 8, 2020 by alimanfoo
18
ProTip! no:milestone will show everything without a milestone.