Automated generation of tailored bioinformatics Jupyter Notebooks via a user interface.
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Updated
Feb 15, 2023 - HTML
Automated generation of tailored bioinformatics Jupyter Notebooks via a user interface.
MultiNicheNet: a flexible framework for differential cell-cell communication analysis from multi-sample multi-condition single-cell transcriptomics data
Workshop in omics integration and systems biology
Retrieves kcat data and adds protein allocation constraints to stoichiometric metabolic models according to the sMOMENT method
Genome-scale metabolic model of Methylococcus capsulatus.
Ontology of algorithms for analyzing biological models, their parameters, and their outputs
The source code and issue tracker for the SBML.org website.
Suite of tools that work on rpSBML format
XitoSBML - the spatial SBML plugin for ImageJ
Context-sensitive creation of kinetic equations in biochemical networks
An environment for curating, validating, and exploring knowledge assemblies encoded in BEL
LibSBMLSim: A library for simulating SBML models (Version 2)
Deep-neural protein translation
University of Cambridge Part III Systems Biology course, practical exercises for learning flux balance analysis
Container of computational models of metabolism for different yeast species.
Complete history of the manuscript "An Optimal Regulation of Fluxes Dictates Microbial Growth In and Out of Steady-State"
An integrative resource for deubiquitinating enzymes (DUBs) served at https://labsyspharm.github.io/dubportal
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